Why Are My Leaves Turning Yellow? 3 Common Nutrient Deficiencies

By Harley Smith
Published: November 25, 2022
Key Takeaways

Yellowing leaves can be caused by just about anything that’s a little out of whack. Here we examine three common nutrient deficiencies.

I spent several years managing a hydroponics store in Michigan, and I can’t tell you how many times a customer would come in and say, “My plant’s leaves are turning yellow. What’s wrong?” I’d usually stop and take a deep breath, because I knew I was going to have to put my detective hat on!

Yellowing leaves can be caused by just about anything that’s a little out of whack in a growroom: low light, overwatering, nutrient deficiencies, nutrient toxicities, root diseases, viruses…or it could just be a symptom of the plant’s natural aging process. Who knows? But when it came down to nutrient deficiencies, I could usually narrow it down to one of three things: magnesium, nitrogen, or iron deficiency.


My first question was always, “Where did the yellowing leaves start to appear, on the bottom of the plant or the top of the plant?”

  • If it was the bottom leaves, my first guess would be magnesium deficiency.
  • If it was the top leaves, my prime suspect was iron deficiency.
  • If it was a general yellowing of the plant, it was probably a nitrogen deficiency.

I’d ask a few more questions, just to narrow things down a little, such as: “Are you growing in soil or hydroponics? What is your pH? What is your EC? What stage of growth are your plants in?” Eventually, I’d make an educated guess and hope I was on the right track.


If you’re growing in hydroponics and you start to see signs of yellowing leaves, don’t panic. Check your pH, check your EC and change out the water with fresh nutrients on a regular basis. Most of the time, the plant will fix itself! But get to know your plants.

Magnesium Deficiency

Cannabis Plant with Magnesium DeficiencyIf a magnesium deficiency starts to develop, the plant will pull magnesium out of the lower leaves.

By far the most common nutrient deficiency in hydroponics is magnesium deficiency. Magnesium is a mobile element, which means if a magnesium deficiency starts to develop, the plant can pull the magnesium out of the lower leaves and transport it to the top leaves where it is needed the most.

Since magnesium is the central element in chlorophyll, the bottom leaves develop interveinal chlorosis—the veins would remain green, but the tissue between the veins would begin to turn yellow.

Plants need plenty of magnesium when their energy requirements are highest, so during times of rapid vegetative growth or heavy fruit production, sometimes plants can’t keep up with demand for magnesium. In this case, adding a little cal-mag to the reservoir, or spraying a little magnesium sulfate on the leaves will green up the plants in a hurry.


During times of rapid vegetative growth, transition periods between grow and bloom, or during heavy fruiting and flowering, giving your plants a dose of extra magnesium could be rewarding.

Sometimes there is plenty of magnesium in the reservoir, but the plants still show signs of a deficiency. In that case, too much potassium may be the problem—a potassium toxicity shows up as a magnesium deficiency. That’s why I ask what stage of growth the plant is in. If it’s in the fruiting and flowering stage and the grower is adding lots of P/K boost, a magnesium deficiency might develop. In that case, I’d recommend backing off a little on the extra potassium. Otherwise, you are only treating the symptoms and you could actually cause more problems by using too many additives. When it comes to plant nutrition, it’s all about balance.



Iron Deficiency

iron deficiency first shows up in the new growth at the top of the plantIron deficiency first shows up in the new growth at the top of the plant.

If yellowing starts to show up in the new growth at the top of the plant, I usually suspect an iron deficiency. Iron is an immobile element and once it’s assimilated by the plant it can’t be easily moved to other parts of the plant. That means that an iron deficiency first shows up in the new growth at the top of the plant. The new leaves start to turn yellow, usually from the stem outward towards the tip of the leaves.

When I suspect an iron deficiency, the first thing I check is my pH levels. Iron is one of the first elements to become unavailable to the plant once the pH rises above 6.5. Once the pH exceeds 7.5, all of the trace metals become unavailable, including iron, copper, manganese and zinc.

So, the first step in correcting an iron deficiency is to reduce the pH to somewhere between 5.8 and 6.4. Once the pH is in the correct zone, the iron will become available again and the leaves will start to turn green.

Iron deficiency is particularly prevalent during times of rapid vegetative growth, when plants are taking up more nitrate-nitrogen. Nitrates are negatively-charged ions and when a plant takes up a nitrate ion, it has to get rid of another negatively-charged ion such as a bicarbonate ion. The more bicarbonate ions leaked by the roots into solution, the higher the pH.

I once tried to grow sweet corn hydroponically, but it was such a heavy nitrate feeder that I had to adjust the pH and EC twice a day. Once the pH rose above 6.5, the leaves would start to develop yellow stripes, but as soon as I lowered the pH the yellow stripes would start to fill in with green again.

To help prevent iron deficiencies during periods of fluctuating pH, the best hydroponic nutrients include iron in a chelated form. Chela means claw, so a chelate attaches to an iron ion like a claw, helping to keep it soluble in the hydroponic solution.

To know which chelate is used, check the label. The three most common synthetic chelates are EDTA, DTPA and EDDHA. EDTA is the weakest, DTPA is stronger and EDDHA is the strongest. EDDHA remains stable even at high pH levels, but it is much more expensive than the other forms. Most hydroponic nutrients include the iron in the DTPA form.

Nitrogen Deficiency

Nitrogen Deficiency in Cannabis Plant LeavesNitrogen deficiency is much more common in soil.

I saved nitrogen deficiency for last because it is fairly uncommon in hydroponics, unless the EC of the nutrient solution is much too low or if carbohydrate additives are used. Most hydroponic nutrient formulas include nitrogen at luxury levels, so even using half-strength nutrients provides adequate nitrogen for most plants.

In fact, nitrogen toxicities are much more common in hydroponics than nitrogen deficiencies. Too much nitrogen promotes lots of lush, green top growth, but restricts root growth. Nitrogen toxicity can also delay or prevent flowering, so make sure that you properly diagnose nitrogen deficiency before arbitrarily adding extra nitrates.

In hydroponics, avoid using sweet carbohydrate products in the reservoir, especially during the vegetative growth stage. Hydroponic nutrients have a high nitrate-to-ammonium ratio – usually about 90% nitrate to 10% ammonium.

If you add carbohydrates to the nutrient solution, the sugars feed micro-organisms, but a competitive advantage is given to the microorganisms that also feed on nitrates, converting them to toxic nitrites.

In some of my lab experiments using added sugars, the nitrate levels were reduced to zero in just a few days. Even the plants that didn’t show yellow leaves still performed poorly compared the plants that weren’t given any carbs.

Nitrogen deficiency is much more common in soil. Nitrates are water soluble, so overwatering can easily leach nitrates out of the root zone. Microorganisms in the soil can also compete with the plant for available nitrogen, especially if the soil has too high of a carbon-to-nitrogen ratio.

Since nitrogen is part of the chlorophyll molecule, the leaves will start to turn pale yellow as the nitrogen deficiency gets worse. Like magnesium, nitrogen is a mobile element, so the first signs of nitrogen deficiency will show up in the lower to middle part of the plant.

But generally speaking, nitrogen deficiency is more of a general yellowing, while magnesium deficiency is more strongly interveinal. To know for sure, take a leaf sample test. Easy-to-use tissue sample test kits are available for nitrogen and reagents will indicate high, adequate or deficient levels of nitrogen in the leaf tissue.

If there is a true nitrogen deficiency, you can try using a general-purpose grow formula to correct the problem, but to be even more precise, specific nitrogen-based fertilizers are also available.

Nitrogen fertilizers can be used at the root zone or as foliar feeds. Just make sure that you only use ammonium-based fertilizers on leaves. Nitrate-based foliar sprays may produce carcinogenic compounds, but ammonium-based fertilizers are safe, just make sure to carefully follow directions to avoid burning the leaves.

Natural alternatives such as amino acids are also effective foliar sprays, but they usually take longer for the plant to respond.

If you've read this article and you're still not sure what is causing the leaves to turn yellow, your best bet is to get help from the grow experts at your local hydroponic store. Good luck!


Share This Article

  • Facebook
  • LinkedIn
  • Twitter

Written by Harley Smith

Profile Picture of Harley Smith
Harley Smith is the director of research for NPK Industries. A veteran in the hydroponics industry, Harley has more than 18 years of consulting and educating experience. He is regarded as an expert on plant nutrition and organic bio-stimulants, performing research and new product development in the US and Europe.

Related Articles

Go back to top
Maximum Yield Logo

You must be 19 years of age or older to enter this site.

Please confirm your date of birth:

This feature requires cookies to be enabled